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Counts and Frequencies of DataCube

FastEEM-Combined2&3 Datacube Frequencies Stats 06-Jan-2005

Measurements:	1535
Patients:	727

NIMI Diagnosis (Worst Dx)

Clinical Menopausal State

Never Gave Birth

Vaginal Deliveries

Referral Pap Diagnosis

Diagnosis

Samples per Diagnosis

Dx	Desc	Count	Perc
3	Superficially Invasive Cancer...........	1	0.07
6	ACIS....................................	1	0.07
7	Sqcis (CIN III).........................	41	2.67
8	Severe dysplasia (CIN III)..............	89	5.8
9	Moderate dysplasia (CIN II).............	113	7.36
10	Mild dysplasia (CIN I)..................	128	8.34
11	HPV associated changes..................	160	10.42
12	Squamous atypia, suggestive of dysplasia	6	0.39
30	negative for dysplasia..................	996	64.89
Total:		1535

Tissue Type

Samples per Tissue Type

TT	Desc	Count	Perc
-999	Missing Data.	2	0.13
1	SQ...........	1433	93.36
2	CO...........	95	6.19
3	TRANFORMATION	5	0.33
Total:		1535

NIMI Diagnosis

Samples per NIMI Diagnosis

DxSix	Desc	Count	Perc
-35	TRFLGSIL.....	1	0.07
-31	TRFN.........	4	0.26
1	SQN..........	914	59.54
2	CON..........	78	5.08
5	LGSIL........	293	19.09
6	HGSIL........	243	15.83
7	ACIS.........	1	0.07
8	CANCER.......	1	0.07
Total:		1535

NIMI Diagnosis (Worst Dx)

Patients per NIMI Diagnosis (Worst Dx)

DxSix	Desc	Count	Perc
1	SQN..........	303	41.68
2	CON..........	51	7.02
5	LGSIL........	186	25.58
6	HGSIL........	185	25.45
7	ACIS.........	1	0.14
8	CANCER.......	1	0.14
Total Patients:		727

BoxId

Samples per BoxId

BoxId	Desc	Count	Perc
1	1............	962	62.67
4	714319.......	573	37.33
Total:		1535

Clinic

Samples per Clinic

Clinic	Desc	Count	Perc
1	MDA..........	714	46.51
2	LBJ..........	248	16.16
5	BCCA.........	573	37.33
Total:		1535

Race

Samples per Race

Race	Desc	Count	Perc
1	White........	973	63.39
2	Black........	174	11.34
3	Hisp.........	204	13.29
4	Native Amer..	16	1.04
5	Asian........	113	7.36
6	Other........	55	3.58
Total:		1535

Clinical Menopausal State

Samples per Clinical Menopausal State

Menopause?	Desc	Count	Perc
-999	Missing Data......................	2	0.13
1	1 -- pre..........................	1299	84.63
2	2 -- post.........................	191	12.44
3	3 -- peri.........................	43	2.8
Total:		1535

Age

Samples per Age

Age	Count	Perc
18	12	0.78
19	20	1.3
20	42	2.74
21	27	1.76
22	34	2.21
23	28	1.82
24	52	3.39
25	66	4.3
26	47	3.06
27	54	3.52
28	50	3.26
29	74	4.82
30	65	4.23
31	63	4.1
32	71	4.63
33	48	3.13
34	40	2.61
35	39	2.54
36	58	3.78
37	51	3.32
38	44	2.87
39	36	2.35
40	52	3.39
41	36	2.35
42	25	1.63
43	26	1.69
44	24	1.56
45	38	2.48
46	24	1.56
47	34	2.21
48	15	0.98
49	31	2.02
50	21	1.37
51	33	2.15
52	18	1.17
53	20	1.3
54	16	1.04
55	6	0.39
56	5	0.33
57	5	0.33
58	10	0.65
59	2	0.13
60	8	0.52
61	7	0.46
62	7	0.46
63	5	0.33
64	3	0.2
65	5	0.33
66	11	0.72
68	3	0.2
69	8	0.52
70	5	0.33
71	2	0.13
72	2	0.13
73	2	0.13
75	3	0.2
85	2	0.13
Total:	1535

Ever Smoked

Samples per Ever_Smoked

Ever_Smoked	Count	Perc
-999	2	0.13
1	645	42.02
2	883	57.52
9	5	0.33
Total:	1535

Never Gave Birth

Samples per Births -never gave births-

Births	Count	Perc
-999	221	14.4
0	892	58.11
1	422	27.49
Total:	1535

Vaginal Deliveries

Samples per VaginalDeliveries

VaginalDeliveries	Count	Perc
-999	596	38.83
0	154	10.03
1	269	17.52
2	276	17.98
3	136	8.86
4	75	4.89
5	14	0.91
6	9	0.59
8	3	0.2
9	3	0.2
Total:	1535

Hormones

Samples per Hormones

Hormones	Count	Perc
-999	2	0.13
0	991	64.56
1	542	35.31
Total:	1535

Menarche Age

Samples per MenarcheAge

MenarcheAge	Count	Perc
-999	4	0.26
8	12	0.78
9	39	2.54
10	65	4.23
11	155	10.1
12	427	27.82
13	431	28.08
14	247	16.09
15	97	6.32
16	45	2.93
17	9	0.59
18	2	0.13
19	2	0.13
Total:	1535

HPV High Risk

Samples per HPV High Risk

HPV High	Count	Perc
-999	18	1.17
0	814	53.03
1	703	45.8
Total:	1535

HPV Low Risk

Samples per HPV Low Risk

HPV Low	Count	Perc
-999	18	1.17
0	1362	88.73
1	155	10.1
Total:	1535

HPV Diagnosis

Samples per HPV Diagnosis (Pos/Neg)

HPV	Count	Perc
-999	18	1.17
0	745	48.53
1	772	50.29
Total:	1535

Referral Pap Diagnosis

Samples per Referral PAP Diagnosis

PAPDx	Count	Perc
-999	739	48.14
0	14	0.91
1	6	0.39
2	57	3.71
4	93	6.06
5	421	27.43
6	158	10.29
7	34	2.21
8	2	0.13
9	4	0.26
99	7	0.46
Total:	1535

Clock Position

Samples per Clock Pos OK

Clock	Count	Perc
1	93	6.06
2	53	3.45
3	150	9.77
4	52	3.39
5	91	5.93
6	378	24.63
7	70	4.56
8	42	2.74
9	109	7.1
10	70	4.56
11	87	5.67
12	340	22.15
Total:	1535

Operator OK

Samples per Operator OK

Op OK	Count	Perc
1	646	42.08
2	547	35.64
3	251	16.35
4	66	4.3
5	22	1.43
6	3	0.2
Total:	1535