Statistical Genomic PFUG webpage
Topics: The focus of this PFUG will be more on statistical aspects of Bioinformatics and genomics. This semester we will concentrate on theoretical and technical issues of dealing with microarray data.
Dr. Marek Kimmel kimmel@rice.eduDr. Rudy Guerra rguerra@rice.eduDaniel Chang thechang@rice.edu
Joseph Vavra jvavra@rice.edu
Viacheslav Fofanov vfofanov@rice.eduBlair Christian blairc@rice.edu
Garret Fox gfox@rice.edu
David Rossell rusi@rice.edu
ZhaoXia Yu yu@rice.edu
Galen Papkov gpapkov@rice.edu
Deepa Rajan drajan@rice.edu
Tuesday 5:30 – 6:30 pm at Martel 103
Thur, Jan 29: Organizational meeting
Tues, Feb 3: Arrays: Biological background by Ezgi Okyay
Tues, Feb 10: Basic Genetics
Tues, Feb 17: Cancelled
Tues, Feb 24: Arrays: Basic data analysis procedures by Ezgi Okyay
Tues, Mar 2: Spring Break
Tues, Mar 9: Differential Expression (theory) by Dr. Rudy Guerra
Tues, Mar 16: Differential Expression (practice) by Viacheslav Fofanov
Tues, Mar 23: PFUG Project
Tues, Mar 30: Classification/Discrimination by ZhaoXia Yu
Tues, Apr 6: Multiple Testing in microarrays by Dr. Rudy Guerra and David Rossell
Tues, Apr 13: Gene networks and arrays by Blair Christian
Tues, Apr 20: Population genetics and Coalescence
Tues, Apr 27: Population genetics and Coalescence
Mar, 12: A genomic database for gene expression. By Dr. Joe Warren
Keck Seminar series
Mar, 19: Discovering function in proteins and proteomes, by Dr. Douglas Brutlag
Keck
Seminar series
“Molecular Biology made simple and fun” by David P. Clark and Lonnie D. Russell is a very comprehensive overview of molecular biology for people in Statistical and Computer Science fields.
“Discovering genomics, proteomics & bioinformatics”, by Campbell & Heyer. ISBN 0805347224
“The analysis of gene expression data”. by Parminiani et. al. ISBN 0387955771
“Microarray gene expression data analysis: A beginner’s guide”, by Causton et. al. ISBN 1405106824
“Microarray Gene Expression Data Analysis” by Quakenbush. ISBN 1405106824
“Statistical Analysis of Gene Expression Microarray Data”, by T. P. Speed. ISBN 1584883278
Useful
Links
Discovering Genomics, Proteomics, and Bioinformatics
Collection of Microarray related papers
This page was last updated 3/29/2004