Chapter 6 – work plan
6.1. Two sequences: Frequency comparison. Self-study.
6.2. Alignments. Self-study.
6.3. Simple tests for significant similarity in an alignment. To be discussed.
6.4. Alignment algorithms for two sequences. Done, re-read.
6.5. Protein sequences and substitution matrices. Incomplete, to be discussed.
6.6. Multiple sequences. Not covered.