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Counts and Frequencies of DataCube Repeated Measures

FastEEM-Combined2&3RepeatedMeasures Datacube Frequencies Stats 20-Dec-2004

Measurements:	239
Patients:	175

NIMI Diagnosis (Worst Dx)

Clinical Menopausal State

Never Gave Birth

Vaginal Deliveries

Referral Pap Diagnosis

Spectra Analysis Emission Range

Diagnosis

Samples per Diagnosis

Dx	Desc	Count	Perc
3	Superficially Invasive Cancer...........	1	0.42
7	Sqcis (CIN III).........................	10	4.18
8	Severe dysplasia (CIN III)..............	24	10.04
9	Moderate dysplasia (CIN II).............	27	11.3
10	Mild dysplasia (CIN I)..................	28	11.72
11	HPV associated changes..................	20	8.37
12	Squamous atypia, suggestive of dysplasia	2	0.84
30	negative for dysplasia..................	127	53.14
Total:		239

Tissue Type

Samples per Tissue Type

TT	Desc	Count	Perc
-999	Missing Data.	1	0.42
1	SQ...........	226	94.56
2	CO...........	12	5.02
Total:		239

NIMI Diagnosis

Samples per NIMI Diagnosis

DxSix	Desc	Count	Perc
1	SQN..........	119	49.79
2	CON..........	8	3.35
5	LGSIL........	50	20.92
6	HGSIL........	61	25.52
8	CANCER.......	1	0.42
Total:		239

NIMI Diagnosis (Worst Dx)

Patients per NIMI Diagnosis (Worst Dx)

DxSix	Desc	Count	Perc
1	SQN..........	73	41.71
2	CON..........	4	2.29
5	LGSIL........	42	24
6	HGSIL........	55	31.43
8	CANCER.......	1	0.57
Total Patients:		175

BoxId

Samples per BoxId

BoxId	Desc	Count	Perc
1	1............	109	45.61
4	714319.......	130	54.39
Total:		239

Clinic

Samples per Clinic

Clinic	Desc	Count	Perc
2	LBJ..........	109	45.61
5	BCCA.........	130	54.39
Total:		239

Race

Samples per Race

Race	Desc	Count	Perc
1	White........	140	58.58
2	Black........	19	7.95
3	Hisp.........	41	17.15
4	Native Amer..	1	0.42
5	Asian........	25	10.46
6	Other........	13	5.44
Total:		239

Clinical Menopausal State

Samples per Clinical Menopausal State

Menopause?	Desc	Count	Perc
1	1 -- pre..........................	216	90.38
2	2 -- post.........................	18	7.53
3	3 -- peri.........................	5	2.09
Total:		239

Age

Samples per Age

Age	Count	Perc
19	3	1.26
20	10	4.18
21	2	0.84
22	7	2.93
23	13	5.44
24	10	4.18
25	8	3.35
26	5	2.09
27	11	4.6
28	3	1.26
29	17	7.11
30	12	5.02
31	9	3.77
32	15	6.28
33	7	2.93
34	5	2.09
35	6	2.51
36	9	3.77
37	8	3.35
38	12	5.02
39	8	3.35
40	7	2.93
41	7	2.93
42	3	1.26
43	4	1.67
44	1	0.42
47	7	2.93
48	3	1.26
49	4	1.67
50	6	2.51
51	2	0.84
54	5	2.09
55	2	0.84
60	1	0.42
62	1	0.42
63	1	0.42
66	4	1.67
70	1	0.42
Total:	239

Ever Smoked

Samples per Ever_Smoked

Ever_Smoked	Count	Perc
1	110	46.03
2	129	53.97
Total:	239

Never Gave Birth

Samples per Births -never gave births-

Births	Count	Perc
-999	76	31.8
0	129	53.97
1	34	14.23
Total:	239

Vaginal Deliveries

Samples per VaginalDeliveries

VaginalDeliveries	Count	Perc
-999	101	42.26
0	20	8.37
1	43	17.99
2	41	17.15
3	20	8.37
4	10	4.18
5	3	1.26
6	1	0.42
Total:	239

Hormones

Samples per Hormones

Hormones	Count	Perc
0	147	61.51
1	92	38.49
Total:	239

Menarche Age

Samples per MenarcheAge

MenarcheAge	Count	Perc
8	2	0.84
9	7	2.93
10	14	5.86
11	30	12.55
12	56	23.43
13	74	30.96
14	39	16.32
15	10	4.18
16	6	2.51
17	1	0.42
Total:	239

HPV High Risk

Samples per HPV High Risk

HPV High	Count	Perc
-999	4	1.67
0	99	41.42
1	136	56.9
Total:	239

HPV Low Risk

Samples per HPV Low Risk

HPV Low	Count	Perc
-999	4	1.67
0	207	86.61
1	28	11.72
Total:	239

HPV Diagnosis

Samples per HPV Diagnosis (Pos/Neg)

HPV	Count	Perc
-999	4	1.67
0	139	58.16
1	96	40.17
Total:	239

Referral Pap Diagnosis

Samples per Referral PAP Diagnosis

PAPDx	Count	Perc
-999	64	26.78
0	3	1.26
1	3	1.26
2	6	2.51
4	16	6.69
5	104	43.51
6	35	14.64
7	6	2.51
8	1	0.42
99	1	0.42
Total:	239

Clock Position

Samples per Clock Pos OK

Clock	Count	Perc
1	16	6.69
2	4	1.67
3	11	4.6
4	4	1.67
5	15	6.28
6	73	30.54
7	12	5.02
8	4	1.67
9	9	3.77
10	8	3.35
11	20	8.37
12	63	26.36
Total:	239

Operator OK

Samples per Operator OK

Op OK	Count	Perc
2	76	31.8
3	96	40.17
4	54	22.59
5	4	1.67
6	8	3.35
7	1	0.42
Total:	239

Spectra Analysis Emission Range

Excitation	Emmision Cut On	Cut Off
330	350	640
340	360	650
350	370	650
360	380	650
370	400	660
380	400	660
390	410	770
400	440	770
410	440	800
420	450	800
430	460	800
440	460	800
450	470	800
460	480	800
470	490	800
480	500	800